| Name | Version | Summary | date |
| multimolecule |
0.0.8 |
Accelerate Molecular Biology Research with Machine Learning |
2025-08-02 20:11:13 |
| amylodeep |
0.1.2 |
Prediction of amyloid propensity from amino acid sequences using ensemble deep learning and LLM models |
2025-07-27 11:09:03 |
| peptides |
0.4.0 |
Physicochemical properties, indices and descriptors for amino-acid sequences. |
2025-07-25 16:25:29 |
| smiffer |
0.3.0 |
Compute possible interaction with fields arround protein or RNA. |
2025-07-25 14:52:36 |
| enzymm |
0.0.2 |
Detect catalytic enzyme residues in protein structures by matching a library of known templates. |
2025-07-20 21:37:02 |
| mvs-story-generator |
0.0.1 |
A Python library for generating MolViewSpec JSON (MVSJ) files for molecular visualizations |
2025-07-20 15:22:56 |
| spaed |
1.0.5 |
A module for the segmentation of phage endolysin domains based on the PAE matrix from AlphaFold. |
2025-07-12 18:42:07 |
| cd-analyzer |
0.1.0 |
A tool for analyzing and plotting circular dichroism (CD) temperature-dependent data and calculating melting temperature (Tm). |
2025-07-12 02:53:16 |
| protclust |
0.1.5.post1 |
Python tools for protein sequence clustering and embedding |
2025-03-21 12:55:27 |
| pyfamsa |
0.5.3.post1 |
Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments. |
2025-03-04 00:33:04 |
| mmseqspy |
0.2.0 |
Python utilities for protein sequence clustering and dataset splitting with MMseqs2 |
2025-02-26 17:42:10 |
| prospr |
1.2.2 |
A toolbox for protein folding with Python. |
2025-02-10 17:50:37 |
| gapclean |
1.0.2 |
Clean up large gappy multiple sequence alignments. |
2025-01-06 23:12:32 |
| aldepyde |
0.0.0a1 |
A package of chemistry and biochemical tools |
2024-12-21 07:42:52 |
| uniproj_2024 |
0.1.7 |
Ce projet a pour but la manipulation et l'analyse de données de protéines issues de la base de données Uniprot via l'implémentation de classes Python. |
2024-11-29 14:01:06 |
| uniprot_lb_poo |
0.1.9 |
Parses uniprot entries (from uniprot files) and creates Uniprot objects |
2024-11-28 10:02:31 |
| configure-dms-viz |
1.6.0 |
Configure your data for visualization with dms-viz.github.io |
2024-11-25 19:49:44 |
| pairwise-sequence-alignment |
1.0.1 |
Global and local pairwise alignments between nucleotide/protein sequences. |
2024-10-30 12:59:52 |
| dockstring |
0.3.4 |
Package for easy ligand preparation and docking with AutoDock Vina against a highly-curated selection of 58 protein targets. One of the three components of the DOCKSTRING bundle (package, dataset, and benchmark tasks). |
2024-10-25 14:04:18 |
| bept |
0.1.0 |
BEPT is a Beginner friendly Electrostatics for Protein analysis Tool, a cross-platform interactive and user-friendly tool for protein electrostatics using APBS and PDB2PQR. |
2024-10-02 06:27:29 |